conda 添加bioconda源,创建/删除/重命名环境

1.conda安装

https://repo.continuum.io/miniconda/选择conda版本

wget "https://repo.continuum.io/archive/Miniconda2-4.5.12-Linux-x86_64.sh"

bash Miniconda2-4.5.12-Linux-x86_64.sh

source ~/.bashrc

2.添加镜像源

conda config --add channels conda-forge
conda config --add channels defaults
conda config --add channels r
conda config --add channels bioconda

3.添加国内镜像源

conda config --add channels https://mirrors.tuna.tsinghua.edu.cn/anaconda/pkgs/free/
conda config --set show_channel_urls yes
conda config --add channels https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/conda-forge/
conda config --add channels https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/msys2/

# bioconda
conda config --add channels https://mirrors.tuna.tsinghua.edu.cn/anaconda/pkgs/free
conda config --set show_channel_urls yes

conda config --add channels https://mirrors.ustc.edu.cn/anaconda/cloud/bioconda/
conda config --set show_channel_urls yes

4.创建新环境

conda create -n py python=3.5

5.删除新环境

conda remove -n py --all

6.重命名环境

conda create -n py3.5 --clone py


conda remove -n py3.5 --all


conda info -e
原文地址:https://www.cnblogs.com/yahengwang/p/10613027.html