安装R的h5包

  • 系统 redhat7

  • 安装H5的包, 依赖系统hdf5包,如下安装完, 发现版本不一致,

      sudo yum install  hdf5-devel
    
  • 解决办法: 移花接木

      sudo ln -s /opt/anaconda3/lib/libhdf5_cpp.so.11 /usr/lib64/    
      sudo ln -s /opt/anaconda3/lib/libhdf5.so.10 /usr/lib64/
      sudo ln -s /opt/anaconda3/lib/libhdf5_cpp.so.12 /usr/lib64/
    
  • 批量处理

      for f in `cat machines`; do  ssh -t $f " sudo ln -s /opt/anaconda3/lib/libhdf5_cpp.so.11 /usr/lib64/; sudo ln -s /opt/anaconda3/lib/libhdf5.so.10 /usr/lib64/ ; sudo ln -s /opt/anaconda3/lib/libhdf5_cpp.so.12 /usr/lib64/"; done
    
      for f in `cat machines`; do  ssh -t $f " sudo yum install  hdf5-devel;echo "install.packages('h5', repos='http://mirrors.aliyun.com/CRAN')" | sudo R --no-save "; done
原文地址:https://www.cnblogs.com/bregman/p/7210389.html